Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
DffaO54786 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
DffaO54786 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.04□□□□□ -0.16
DffaO54786 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.04□□□□□ -0.16
DffaO54786 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.04□□□□□ -0.16
DffaO54786 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
DffaO54786 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
DffaO54786 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
DffaO54786 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.04□□□□□ -0.16
DffaO54786 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
DffaO54786 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.03□□□□□ -0.16
DffaO54786 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.03□□□□□ -0.16
DffaO54786 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.03□□□□□ -0.16
DffaO54786 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.03□□□□□ -0.16
DffaO54786 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
DffaO54786 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
DffaO54786 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.02□□□□□ -0.16
DffaO54786 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
DffaO54786 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
DffaO54786 Syt7-205ENSMUST00000224135 1557 ntBASIC14.02□□□□□ -0.16
DffaO54786 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.02□□□□□ -0.16
DffaO54786 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.02□□□□□ -0.16
DffaO54786 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
DffaO54786 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DffaO54786 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DffaO54786 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm12403-201ENSMUST00000121384 959 ntBASIC14.02□□□□□ -0.17
DffaO54786 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
DffaO54786 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.02□□□□□ -0.17
DffaO54786 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.02□□□□□ -0.17
DffaO54786 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
DffaO54786 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms