Protein–RNA interactions for Protein: F6SW83

Gm10477, Predicted gene 10477, mousemouse

Predictions only

Length 55 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10477F6SW83 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm10477F6SW83 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.39□□□□□ -0.43
Gm10477F6SW83 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Gm10477F6SW83 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.39□□□□□ -0.43
Gm10477F6SW83 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Mir698-201ENSMUST00000102164 109 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.38□□□□□ -0.43
Gm10477F6SW83 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Gm10477F6SW83 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.37□□□□□ -0.43
Gm10477F6SW83 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Gm10477F6SW83 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.37□□□□□ -0.43
Gm10477F6SW83 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm10477F6SW83 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms