Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm28911-201ENSMUST00000188837 117 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm44397-201ENSMUST00000195950 113 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm45384-201ENSMUST00000210451 277 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Cpsf4lE9Q2N0 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cpsf4lE9Q2N0 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Cpsf4lE9Q2N0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC11.33□□□□□ -0.59
Cpsf4lE9Q2N0 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Cpsf4lE9Q2N0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm11918-201ENSMUST00000121660 179 ntBASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm12138-201ENSMUST00000122180 951 ntBASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Gm45841-201ENSMUST00000207700 164 ntBASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.33□□□□□ -0.6
Cpsf4lE9Q2N0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms