Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn3aA2ASI5 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3aA2ASI5 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn3aA2ASI5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Scn3aA2ASI5 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Gm10434-201ENSMUST00000101158 471 ntBASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Gm24526-201ENSMUST00000082921 158 ntBASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn3aA2ASI5 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm25043-201ENSMUST00000158604 212 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm23363-201ENSMUST00000175024 79 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Cts7-204ENSMUST00000225321 1257 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm15459-201ENSMUST00000117405 1941 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm8355-201ENSMUST00000177767 1941 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn3aA2ASI5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Gm11964-201ENSMUST00000120982 444 ntBASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Gm8227-201ENSMUST00000223306 571 ntBASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Scn3aA2ASI5 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.77□□□□□ -0.05
Scn3aA2ASI5 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms