Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Ccdc194A0A140LIT1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Gm13616-201ENSMUST00000120600 222 ntBASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Ccdc194A0A140LIT1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccdc194A0A140LIT1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Ccdc194A0A140LIT1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccdc194A0A140LIT1 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms