Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Trav8-1A0A075B641 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm17435-202ENSMUST00000212699 1998 ntBASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm45098-201ENSMUST00000207179 657 ntBASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Gm37324-201ENSMUST00000194500 4504 ntBASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.59□□□□□ -0.87
Trav8-1A0A075B641 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm15173-201ENSMUST00000122049 433 ntBASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC9.58□□□□□ -0.88
Trav8-1A0A075B641 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms