Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gm37660-201ENSMUST00000192754 1732 ntBASIC10.31□□□□□ -0.76
PdfS4R2K0 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC10.31□□□□□ -0.76
PdfS4R2K0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC10.31□□□□□ -0.76
PdfS4R2K0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.31□□□□□ -0.76
PdfS4R2K0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
PdfS4R2K0 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
PdfS4R2K0 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 AC126549.2-201ENSMUST00000223997 1976 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm25287-201ENSMUST00000103846 110 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm22918-201ENSMUST00000103855 110 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm5312-201ENSMUST00000203728 547 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm44872-201ENSMUST00000207864 420 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm9109-201ENSMUST00000120254 1405 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Gm37795-201ENSMUST00000194216 2459 ntBASIC10.3□□□□□ -0.76
PdfS4R2K0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
PdfS4R2K0 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
PdfS4R2K0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
PdfS4R2K0 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC10.29□□□□□ -0.76
PdfS4R2K0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms