Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Prpf40aQ9R1C7 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.8□□□□□ -0.04
Prpf40aQ9R1C7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Prpf40aQ9R1C7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Prpf40aQ9R1C7 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Prpf40aQ9R1C7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gm28631-201ENSMUST00000190740 334 ntBASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gm2423-201ENSMUST00000074863 733 ntBASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Prpf40aQ9R1C7 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms