Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm15376-201ENSMUST00000122258 783 ntBASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm26464-201ENSMUST00000157094 305 ntBASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clcf1Q9QZM3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm44065-201ENSMUST00000203184 3527 ntBASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm15806-201ENSMUST00000120696 955 ntBASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clcf1Q9QZM3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Clcf1Q9QZM3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms