Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm43598-201ENSMUST00000202482 2479 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm17208-201ENSMUST00000168388 535 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm20426-201ENSMUST00000173657 440 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nkx2-4Q9EQM3 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nkx2-4Q9EQM3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Gm44100-201ENSMUST00000204329 436 ntBASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Gm44262-201ENSMUST00000204969 372 ntBASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nkx2-4Q9EQM3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Gm13665-201ENSMUST00000120830 528 ntBASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nkx2-4Q9EQM3 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms