Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Hdhd3Q9CYW4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.9□□□□□ -0.66
Hdhd3Q9CYW4 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Hdhd3Q9CYW4 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Hdhd3Q9CYW4 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Hdhd3Q9CYW4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm45743-201ENSMUST00000212701 2795 ntBASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm17271-201ENSMUST00000165535 355 ntBASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm18737-201ENSMUST00000173594 937 ntBASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm18057-201ENSMUST00000208220 503 ntBASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hdhd3Q9CYW4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms