Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ssr1Q9CY50 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Shd-206ENSMUST00000225145 998 ntBASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ssr1Q9CY50 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Gm26308-201ENSMUST00000157768 69 ntBASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Gm27622-201ENSMUST00000183779 60 ntBASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Mir497b-201ENSMUST00000093601 125 ntBASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ssr1Q9CY50 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.61□□□□□ -0.07
Ssr1Q9CY50 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms