Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col25a1Q99MQ5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm25880-201ENSMUST00000104331 132 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm12795-201ENSMUST00000117594 539 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm11591-201ENSMUST00000120063 702 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm15276-201ENSMUST00000145953 498 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm30285-201ENSMUST00000214614 422 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm10146-201ENSMUST00000072739 309 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col25a1Q99MQ5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gm23699-201ENSMUST00000158835 135 ntBASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gm42550-201ENSMUST00000201553 960 ntBASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 AC174797.2-202ENSMUST00000225729 568 ntBASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col25a1Q99MQ5 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm7809-201ENSMUST00000153199 742 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm27772-201ENSMUST00000184900 187 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm37042-201ENSMUST00000193816 581 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm31256-201ENSMUST00000194705 506 ntBASIC13.86□□□□□ -0.19
Col25a1Q99MQ5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms