Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb1Q91Y08 Syt7-205ENSMUST00000224135 1557 ntBASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gm28631-201ENSMUST00000190740 334 ntBASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gm45841-201ENSMUST00000207700 164 ntBASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb1Q91Y08 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb1Q91Y08 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm27437-201ENSMUST00000183429 107 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Mir6977-201ENSMUST00000184960 64 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm29608-201ENSMUST00000190444 463 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb1Q91Y08 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdhb1Q91Y08 Mir7221-201ENSMUST00000184009 72 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms