Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Mir449b-201ENSMUST00000104833 80 ntBASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gm42919-201ENSMUST00000197753 1284 ntBASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhb3Q91XZ7 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhb3Q91XZ7 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 AA543401-201ENSMUST00000164248 1269 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm25948-201ENSMUST00000175334 112 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm37629-201ENSMUST00000193635 1050 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm10253-201ENSMUST00000194270 940 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhb3Q91XZ7 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 CT025678.1-201ENSMUST00000214795 2972 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhb3Q91XZ7 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms