Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Gm13223-201ENSMUST00000118609 747 ntBASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Gm25925-201ENSMUST00000158314 306 ntBASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhb4Q91XZ6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdhb4Q91XZ6 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.36□□□□□ -0.27
Pcdhb4Q91XZ6 Gm7775-201ENSMUST00000218871 853 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms