Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga4Q91XY4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Pcdhga4Q91XY4 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm12091-201ENSMUST00000146791 830 ntBASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga4Q91XY4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhga4Q91XY4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms