Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhga6Q91XY2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Gm12485-201ENSMUST00000119641 291 ntBASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga6Q91XY2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdhga6Q91XY2 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga6Q91XY2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm11803-201ENSMUST00000119966 444 ntBASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm37008-201ENSMUST00000195712 319 ntBASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Gm18027-201ENSMUST00000218947 619 ntBASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga6Q91XY2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms