Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nudcd3Q8R1N4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Mir874-201ENSMUST00000104769 76 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm18889-201ENSMUST00000174284 929 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm8927-201ENSMUST00000181978 981 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Gm3222-201ENSMUST00000071282 990 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nudcd3Q8R1N4 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gm16476-201ENSMUST00000221544 139 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nudcd3Q8R1N4 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms