Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.86■□□□□ 0.13
Atf7Q8R0S1 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Gm12341-201ENSMUST00000119724 503 ntBASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.85■□□□□ 0.13
Atf7Q8R0S1 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Atf7Q8R0S1 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Mir874-201ENSMUST00000104769 76 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm7488-201ENSMUST00000117148 684 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm42550-201ENSMUST00000201553 960 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 AC156560.2-201ENSMUST00000221232 264 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Atf7Q8R0S1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atf7Q8R0S1 Gm5989-201ENSMUST00000096092 2077 ntBASIC15.83■□□□□ 0.13
Atf7Q8R0S1 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atf7Q8R0S1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Atf7Q8R0S1 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Mir7221-201ENSMUST00000184009 72 ntBASIC15.83■□□□□ 0.12
Atf7Q8R0S1 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Gm43423-201ENSMUST00000198390 2094 ntBASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Atf7Q8R0S1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms