Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Cystm1Q8K353 Gm44806-201ENSMUST00000205574 2303 ntBASIC8.45□□□□□ -1.06
Cystm1Q8K353 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm12020-201ENSMUST00000119030 2042 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm43860-201ENSMUST00000201742 2705 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Mir6990-201ENSMUST00000183724 91 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm10154-201ENSMUST00000084445 354 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm13332-201ENSMUST00000120451 1398 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 AC122840.1-201ENSMUST00000220915 3334 ntBASIC8.44□□□□□ -1.06
Cystm1Q8K353 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Cystm1Q8K353 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 AC025913.2-201ENSMUST00000220136 1766 ntBASIC8.43□□□□□ -1.06
Cystm1Q8K353 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Gm37472-201ENSMUST00000192342 4052 ntBASIC8.43□□□□□ -1.06
Cystm1Q8K353 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Cystm1Q8K353 Gm12017-201ENSMUST00000122453 1003 ntBASIC8.43□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms