Protein–RNA interactions for Protein: Q8CGP5

Hist1h2af, Histone H2A type 1-F, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2afQ8CGP5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hist1h2afQ8CGP5 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Gm27321-201ENSMUST00000185021 205 ntBASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hist1h2afQ8CGP5 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm43703-201ENSMUST00000200523 763 ntBASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Grk6-205ENSMUST00000224653 2976 ntBASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hist1h2afQ8CGP5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hist1h2afQ8CGP5 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms