Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm18889-201ENSMUST00000174284 929 ntBASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Tsen54Q8C2A2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Tsen54Q8C2A2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Tsen54Q8C2A2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms