Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.52□□□□□ -0.25
Ubr7Q8BU04 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ubr7Q8BU04 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm23931-201ENSMUST00000103842 109 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm16202-201ENSMUST00000117532 544 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm12384-201ENSMUST00000119228 919 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm13369-201ENSMUST00000119442 987 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm27682-201ENSMUST00000183930 110 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm43818-201ENSMUST00000200605 466 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Gm45841-201ENSMUST00000207700 164 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr7Q8BU04 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm40466-201ENSMUST00000212174 422 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr7Q8BU04 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms