Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SynbQ8BI41 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Gm15429-201ENSMUST00000151268 798 ntBASIC12.86□□□□□ -0.35
SynbQ8BI41 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SynbQ8BI41 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.86□□□□□ -0.35
SynbQ8BI41 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.86□□□□□ -0.35
SynbQ8BI41 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.86□□□□□ -0.35
SynbQ8BI41 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.86□□□□□ -0.35
SynbQ8BI41 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SynbQ8BI41 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm18027-201ENSMUST00000218947 619 ntBASIC12.85□□□□□ -0.35
SynbQ8BI41 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.85□□□□□ -0.35
SynbQ8BI41 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.85□□□□□ -0.35
SynbQ8BI41 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SynbQ8BI41 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.84□□□□□ -0.35
SynbQ8BI41 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm12928-201ENSMUST00000117115 573 ntBASIC12.84□□□□□ -0.35
SynbQ8BI41 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.84□□□□□ -0.35
SynbQ8BI41 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.84□□□□□ -0.35
SynbQ8BI41 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm43094-201ENSMUST00000196549 921 ntBASIC12.84□□□□□ -0.35
SynbQ8BI41 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.84□□□□□ -0.35
SynbQ8BI41 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.84□□□□□ -0.35
SynbQ8BI41 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.84□□□□□ -0.35
SynbQ8BI41 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SynbQ8BI41 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SynbQ8BI41 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SynbQ8BI41 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms