Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm6222-201ENSMUST00000120787 396 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Slc5a7Q8BGY9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Mir5126-201ENSMUST00000175513 77 ntBASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.74□□□□□ -0.53
Slc5a7Q8BGY9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Gm5364-201ENSMUST00000216789 889 ntBASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Slc5a7Q8BGY9 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms