Protein–RNA interactions for Protein: Q80U78

Pum1, Pumilio homolog 1, mousemouse

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum1Q80U78 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Pum1Q80U78 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Pum1Q80U78 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Pum1Q80U78 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pum1Q80U78 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pum1Q80U78 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pum1Q80U78 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Gm3508-201ENSMUST00000186012 792 ntBASIC13.35□□□□□ -0.27
Pum1Q80U78 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.35□□□□□ -0.27
Pum1Q80U78 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pum1Q80U78 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Mir686-201ENSMUST00000102174 109 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12616-201ENSMUST00000118594 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm4986-201ENSMUST00000119731 549 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12882-201ENSMUST00000121696 517 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12624-201ENSMUST00000177615 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12621-201ENSMUST00000177760 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12615-201ENSMUST00000177970 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12622-201ENSMUST00000177975 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12627-201ENSMUST00000178412 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12625-201ENSMUST00000179122 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12614-201ENSMUST00000179586 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm12613-201ENSMUST00000180323 382 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm37835-201ENSMUST00000193305 361 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Gm7046-201ENSMUST00000221351 977 ntBASIC13.34□□□□□ -0.27
Pum1Q80U78 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Pum1Q80U78 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pum1Q80U78 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pum1Q80U78 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pum1Q80U78 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pum1Q80U78 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Pum1Q80U78 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms