Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SspnQ62147 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SspnQ62147 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SspnQ62147 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SspnQ62147 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.29□□□□□ -0.6
SspnQ62147 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SspnQ62147 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.28□□□□□ -0.6
SspnQ62147 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.28□□□□□ -0.6
SspnQ62147 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.28□□□□□ -0.6
SspnQ62147 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.28□□□□□ -0.6
SspnQ62147 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.28□□□□□ -0.6
SspnQ62147 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm8927-201ENSMUST00000181978 981 ntBASIC11.28□□□□□ -0.6
SspnQ62147 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.28□□□□□ -0.6
SspnQ62147 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.28□□□□□ -0.6
SspnQ62147 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
SspnQ62147 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Gm3222-201ENSMUST00000071282 990 ntBASIC11.28□□□□□ -0.6
SspnQ62147 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SspnQ62147 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SspnQ62147 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
SspnQ62147 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SspnQ62147 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
SspnQ62147 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
SspnQ62147 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
SspnQ62147 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
SspnQ62147 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.27□□□□□ -0.61
SspnQ62147 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.27□□□□□ -0.61
SspnQ62147 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
SspnQ62147 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Gm14767-201ENSMUST00000121559 586 ntBASIC11.27□□□□□ -0.61
SspnQ62147 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC11.27□□□□□ -0.61
SspnQ62147 Gm3436-201ENSMUST00000179930 840 ntBASIC11.27□□□□□ -0.61
SspnQ62147 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Gm27618-201ENSMUST00000183671 60 ntBASIC11.27□□□□□ -0.61
SspnQ62147 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.27□□□□□ -0.61
SspnQ62147 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
SspnQ62147 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.27□□□□□ -0.61
SspnQ62147 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
SspnQ62147 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms