Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC11.98□□□□□ -0.49
Traf4Q61382 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Gm6912-201ENSMUST00000117218 544 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm11478-201ENSMUST00000117851 599 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm14127-201ENSMUST00000117906 678 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm12138-201ENSMUST00000122180 951 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Traf4Q61382 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.98□□□□□ -0.49
Traf4Q61382 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Gm18187-201ENSMUST00000196476 984 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm43438-201ENSMUST00000198133 379 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.98□□□□□ -0.49
Traf4Q61382 Gm19220-201ENSMUST00000222682 803 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.98□□□□□ -0.49
Traf4Q61382 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Traf4Q61382 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Traf4Q61382 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Traf4Q61382 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Traf4Q61382 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Traf4Q61382 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.97□□□□□ -0.49
Traf4Q61382 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.97□□□□□ -0.49
Traf4Q61382 Gm15957-201ENSMUST00000118893 974 ntBASIC11.97□□□□□ -0.49
Traf4Q61382 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.97□□□□□ -0.49
Traf4Q61382 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.97□□□□□ -0.49
Traf4Q61382 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Traf4Q61382 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.97□□□□□ -0.49
Traf4Q61382 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.97□□□□□ -0.49
Traf4Q61382 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Traf4Q61382 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.97□□□□□ -0.49
Traf4Q61382 AC130829.1-201ENSMUST00000221548 494 ntBASIC11.97□□□□□ -0.49
Traf4Q61382 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.97□□□□□ -0.49
Traf4Q61382 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Traf4Q61382 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Traf4Q61382 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Traf4Q61382 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Traf4Q61382 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Traf4Q61382 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Traf4Q61382 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.96□□□□□ -0.49
Traf4Q61382 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Traf4Q61382 Mir6392-201ENSMUST00000184924 108 ntBASIC11.96□□□□□ -0.49
Traf4Q61382 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Traf4Q61382 Gm43433-201ENSMUST00000196573 481 ntBASIC11.96□□□□□ -0.49
Traf4Q61382 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.96□□□□□ -0.49
Traf4Q61382 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Traf4Q61382 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Traf4Q61382 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC11.96□□□□□ -0.49
Traf4Q61382 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Traf4Q61382 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Traf4Q61382 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Traf4Q61382 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Traf4Q61382 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Traf4Q61382 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Traf4Q61382 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms