Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Grk6-205ENSMUST00000224653 2976 ntBASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.28□□□□□ -0.12
Shroom1Q5SX79 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Shroom1Q5SX79 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Gm22331-201ENSMUST00000158066 136 ntBASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Shroom1Q5SX79 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm15770-201ENSMUST00000117498 584 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm27514-201ENSMUST00000183692 110 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Itm2b-204ENSMUST00000228637 783 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Shroom1Q5SX79 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Shroom1Q5SX79 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms