Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ttc9Q3V038 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm24196-201ENSMUST00000179161 110 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.34□□□□□ -0.11
Ttc9Q3V038 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ttc9Q3V038 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ttc9Q3V038 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ttc9Q3V038 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ttc9Q3V038 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Ttc9Q3V038 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ttc9Q3V038 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Mir7070-201ENSMUST00000183657 86 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm43094-201ENSMUST00000196549 921 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm43818-201ENSMUST00000200605 466 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm45880-201ENSMUST00000213041 853 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm19309-201ENSMUST00000218295 205 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm17330-201ENSMUST00000221047 165 ntBASIC14.33□□□□□ -0.12
Ttc9Q3V038 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ttc9Q3V038 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ttc9Q3V038 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms