Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gm45098-201ENSMUST00000207179 657 ntBASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Zfp125-201ENSMUST00000079237 2488 ntBASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Rnf17-202ENSMUST00000223627 2077 ntBASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Cks1brtQ3UNC9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 CT025624.1-201ENSMUST00000224007 2700 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm37153-201ENSMUST00000193637 231 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm9484-201ENSMUST00000195892 1159 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm17808-201ENSMUST00000200859 894 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Gm18246-201ENSMUST00000221023 728 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cks1brtQ3UNC9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cks1brtQ3UNC9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms