Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
Col9a2Q07643 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Col9a2Q07643 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.52□□□□□ -0.09
Col9a2Q07643 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col9a2Q07643 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm12363-201ENSMUST00000122250 668 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Snora73a-201ENSMUST00000082453 205 ntBASIC14.51□□□□□ -0.09
Col9a2Q07643 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.51□□□□□ -0.09
Col9a2Q07643 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col9a2Q07643 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm5466-201ENSMUST00000119395 1890 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm16479-201ENSMUST00000121706 932 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm27516-201ENSMUST00000184237 98 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm38002-201ENSMUST00000193255 180 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Col9a2Q07643 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Col9a2Q07643 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col9a2Q07643 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.5□□□□□ -0.09
Col9a2Q07643 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Col9a2Q07643 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col9a2Q07643 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms