Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-3P97334 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.75■□□□□ 0.27
Nkx2-3P97334 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nkx2-3P97334 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nkx2-3P97334 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Gm11964-201ENSMUST00000120982 444 ntBASIC16.74■□□□□ 0.27
Nkx2-3P97334 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC16.74■□□□□ 0.27
Nkx2-3P97334 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.74■□□□□ 0.27
Nkx2-3P97334 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.74■□□□□ 0.27
Nkx2-3P97334 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nkx2-3P97334 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC16.73■□□□□ 0.27
Nkx2-3P97334 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm12997-201ENSMUST00000120207 640 ntBASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Mir7070-201ENSMUST00000183657 86 ntBASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm19891-201ENSMUST00000189771 303 ntBASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm38000-201ENSMUST00000192390 1215 ntBASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Nkx2-3P97334 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gm8228-201ENSMUST00000189949 2192 ntBASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gm25214-201ENSMUST00000104573 129 ntBASIC16.72■□□□□ 0.27
Nkx2-3P97334 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Gm27320-201ENSMUST00000184892 109 ntBASIC16.72■□□□□ 0.27
Nkx2-3P97334 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Nkx2-3P97334 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-3P97334 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms