Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Tpm2P58774 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC15.42■□□□□ 0.06
Tpm2P58774 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Tpm2P58774 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Tpm2P58774 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.42■□□□□ 0.06
Tpm2P58774 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Tpm2P58774 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.41■□□□□ 0.06
Tpm2P58774 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.41■□□□□ 0.06
Tpm2P58774 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.41■□□□□ 0.06
Tpm2P58774 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tpm2P58774 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Tpm2P58774 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Tpm2P58774 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Tpm2P58774 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tpm2P58774 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tpm2P58774 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Tpm2P58774 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tpm2P58774 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.4■□□□□ 0.06
Tpm2P58774 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.4■□□□□ 0.06
Tpm2P58774 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tpm2P58774 Gm29310-201ENSMUST00000185468 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21825-201ENSMUST00000185728 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm29109-201ENSMUST00000185895 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21896-201ENSMUST00000186520 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21873-201ENSMUST00000186728 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21794-201ENSMUST00000187056 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21880-201ENSMUST00000187275 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21826-201ENSMUST00000187451 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21198-201ENSMUST00000188393 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21749-201ENSMUST00000189343 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21901-201ENSMUST00000189568 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm29424-201ENSMUST00000189716 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm28599-201ENSMUST00000189838 694 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21867-201ENSMUST00000189917 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm29269-201ENSMUST00000190087 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21722-201ENSMUST00000190153 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm28423-201ENSMUST00000190701 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21899-201ENSMUST00000190745 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21910-201ENSMUST00000191163 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21849-201ENSMUST00000191571 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm28678-201ENSMUST00000191593 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm20910-201ENSMUST00000193268 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm21871-201ENSMUST00000194621 696 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.4■□□□□ 0.06
Tpm2P58774 Gm45612-201ENSMUST00000211320 160 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.4■□□□□ 0.06
Tpm2P58774 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Tpm2P58774 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Tpm2P58774 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.4■□□□□ 0.06
Tpm2P58774 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Tpm2P58774 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Tpm2P58774 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Tpm2P58774 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Tpm2P58774 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm2P58774 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm2P58774 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm2P58774 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Tpm2P58774 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms