Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.97□□□□□ -0.01
Tpm1P58771 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.97□□□□□ -0.01
Tpm1P58771 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Tpm1P58771 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Tpm1P58771 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.97□□□□□ -0.01
Tpm1P58771 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.97□□□□□ -0.01
Tpm1P58771 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Tpm1P58771 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.97□□□□□ -0.01
Tpm1P58771 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.97□□□□□ -0.01
Tpm1P58771 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Tpm1P58771 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Tpm1P58771 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Gm43417-201ENSMUST00000201586 5207 ntBASIC14.96□□□□□ -0.01
Tpm1P58771 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.96□□□□□ -0.01
Tpm1P58771 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Tpm1P58771 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Tpm1P58771 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.96□□□□□ -0.01
Tpm1P58771 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Tpm1P58771 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Gm9824-201ENSMUST00000178707 561 ntBASIC14.96□□□□□ -0.01
Tpm1P58771 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.96□□□□□ -0.01
Tpm1P58771 Gm7049-201ENSMUST00000223520 1712 ntBASIC14.96□□□□□ -0.01
Tpm1P58771 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Tpm1P58771 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Tpm1P58771 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tpm1P58771 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tpm1P58771 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Tpm1P58771 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tpm1P58771 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Tpm1P58771 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Tpm1P58771 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC14.95□□□□□ -0.02
Tpm1P58771 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Tpm1P58771 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Tpm1P58771 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tpm1P58771 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tpm1P58771 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.95□□□□□ -0.02
Tpm1P58771 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.95□□□□□ -0.02
Tpm1P58771 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
Tpm1P58771 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.95□□□□□ -0.02
Tpm1P58771 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.95□□□□□ -0.02
Tpm1P58771 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tpm1P58771 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Tpm1P58771 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tpm1P58771 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms