Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Mir874-201ENSMUST00000104769 76 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm11557-201ENSMUST00000120200 1008 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm8927-201ENSMUST00000181978 981 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Gm43125-201ENSMUST00000201724 730 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 AC124549.3-201ENSMUST00000225541 367 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm3222-201ENSMUST00000071282 990 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Sssca1P56873 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.85□□□□□ -0.67
Sssca1P56873 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.85□□□□□ -0.67
Sssca1P56873 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Sssca1P56873 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.84□□□□□ -0.67
Sssca1P56873 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm15460-201ENSMUST00000118147 391 ntBASIC10.84□□□□□ -0.67
Sssca1P56873 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.84□□□□□ -0.67
Sssca1P56873 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Sssca1P56873 Mir6990-201ENSMUST00000183724 91 ntBASIC10.84□□□□□ -0.67
Sssca1P56873 Gm21470-201ENSMUST00000187680 696 ntBASIC10.84□□□□□ -0.67
Sssca1P56873 Gm29541-201ENSMUST00000191351 678 ntBASIC10.84□□□□□ -0.67
Sssca1P56873 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sssca1P56873 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Sssca1P56873 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Sssca1P56873 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Sssca1P56873 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Gm24543-201ENSMUST00000103867 82 ntBASIC10.83□□□□□ -0.68
Sssca1P56873 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sssca1P56873 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sssca1P56873 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms