Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Sox1P53783 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Sox1P53783 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
Sox1P53783 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Sox1P53783 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Gm12816-201ENSMUST00000118069 1212 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Gm13996-201ENSMUST00000118456 430 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Gm7666-201ENSMUST00000146631 819 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Gm26185-201ENSMUST00000157692 266 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC13.66□□□□□ -0.22
Sox1P53783 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.66□□□□□ -0.22
Sox1P53783 Gm8365-201ENSMUST00000197334 648 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Ntng1-201ENSMUST00000051253 327 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.66□□□□□ -0.22
Sox1P53783 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Sox1P53783 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Sox1P53783 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
Sox1P53783 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Gm12795-201ENSMUST00000117594 539 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Gm11637-201ENSMUST00000120601 592 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Gm15547-201ENSMUST00000122152 333 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC13.65□□□□□ -0.22
Sox1P53783 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox1P53783 Gm2546-201ENSMUST00000182630 991 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.65□□□□□ -0.22
Sox1P53783 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Sox1P53783 Gm7848-201ENSMUST00000210739 718 ntBASIC13.65□□□□□ -0.22
Sox1P53783 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.65□□□□□ -0.22
Sox1P53783 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Sox1P53783 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Sox1P53783 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Sox1P53783 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Sox1P53783 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.64□□□□□ -0.23
Sox1P53783 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.64□□□□□ -0.23
Sox1P53783 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.64□□□□□ -0.23
Sox1P53783 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms