Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Sox6P40645 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.64□□□□□ -0.39
Sox6P40645 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Sox6P40645 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Sox6P40645 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Sox6P40645 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
Sox6P40645 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.63□□□□□ -0.39
Sox6P40645 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.63□□□□□ -0.39
Sox6P40645 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Gm27680-201ENSMUST00000184192 160 ntBASIC12.63□□□□□ -0.39
Sox6P40645 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Sox6P40645 Gm6916-202ENSMUST00000205523 195 ntBASIC12.63□□□□□ -0.39
Sox6P40645 Gm9229-201ENSMUST00000222777 126 ntBASIC12.63□□□□□ -0.39
Sox6P40645 AC156016.3-201ENSMUST00000228623 344 ntBASIC12.63□□□□□ -0.39
Sox6P40645 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Sox6P40645 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.62□□□□□ -0.39
Sox6P40645 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox6P40645 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.62□□□□□ -0.39
Sox6P40645 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox6P40645 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.62□□□□□ -0.39
Sox6P40645 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox6P40645 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Sox6P40645 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.62□□□□□ -0.39
Sox6P40645 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Sox6P40645 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Sox6P40645 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Gm13223-201ENSMUST00000118609 747 ntBASIC12.62□□□□□ -0.39
Sox6P40645 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Sox6P40645 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Gm33320-201ENSMUST00000192232 530 ntBASIC12.62□□□□□ -0.39
Sox6P40645 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Sox6P40645 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Sox6P40645 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Sox6P40645 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Sox6P40645 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.61□□□□□ -0.39
Sox6P40645 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Sox6P40645 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Sox6P40645 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms