Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cxcl12P40224 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Cxcl12P40224 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cxcl12P40224 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.74□□□□□ -0.21
Cxcl12P40224 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Gm20426-201ENSMUST00000173657 440 ntBASIC13.74□□□□□ -0.21
Cxcl12P40224 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Gm6458-201ENSMUST00000211573 635 ntBASIC13.74□□□□□ -0.21
Cxcl12P40224 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.74□□□□□ -0.21
Cxcl12P40224 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.74□□□□□ -0.21
Cxcl12P40224 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cxcl12P40224 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cxcl12P40224 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cxcl12P40224 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm11628-201ENSMUST00000117568 171 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm37835-201ENSMUST00000193305 361 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm44100-201ENSMUST00000204329 436 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm44262-201ENSMUST00000204969 372 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.73□□□□□ -0.21
Cxcl12P40224 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.73□□□□□ -0.21
Cxcl12P40224 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cxcl12P40224 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.72□□□□□ -0.21
Cxcl12P40224 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm14109-201ENSMUST00000118814 309 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm9550-201ENSMUST00000161130 862 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm3096-201ENSMUST00000185770 364 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm45118-201ENSMUST00000208928 825 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms