Protein–RNA interactions for Protein: P35583

Foxa2, Hepatocyte nuclear factor 3-beta, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa2P35583 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC11.3□□□□□ -0.6
Foxa2P35583 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gm15487-201ENSMUST00000122373 465 ntBASIC11.3□□□□□ -0.6
Foxa2P35583 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.3□□□□□ -0.6
Foxa2P35583 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gm21854-201ENSMUST00000179901 471 ntBASIC11.3□□□□□ -0.6
Foxa2P35583 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gm17330-201ENSMUST00000221047 165 ntBASIC11.3□□□□□ -0.6
Foxa2P35583 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Foxa2P35583 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Foxa2P35583 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Foxa2P35583 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Gm6263-201ENSMUST00000120029 1342 ntBASIC11.3□□□□□ -0.6
Foxa2P35583 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Foxa2P35583 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Foxa2P35583 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Foxa2P35583 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Syt7-205ENSMUST00000224135 1557 ntBASIC11.29□□□□□ -0.6
Foxa2P35583 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Foxa2P35583 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxa2P35583 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxa2P35583 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC11.29□□□□□ -0.6
Foxa2P35583 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Foxa2P35583 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.29□□□□□ -0.6
Foxa2P35583 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Foxa2P35583 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.29□□□□□ -0.6
Foxa2P35583 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.29□□□□□ -0.6
Foxa2P35583 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Foxa2P35583 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Foxa2P35583 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.28□□□□□ -0.6
Foxa2P35583 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxa2P35583 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxa2P35583 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Foxa2P35583 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.28□□□□□ -0.6
Foxa2P35583 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms