Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Col8a2P25318 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Col8a2P25318 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col8a2P25318 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col8a2P25318 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Col8a2P25318 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.21□□□□□ -0.62
Col8a2P25318 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.21□□□□□ -0.62
Col8a2P25318 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Col8a2P25318 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Col8a2P25318 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Gm4984-201ENSMUST00000115987 360 ntBASIC11.2□□□□□ -0.62
Col8a2P25318 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.2□□□□□ -0.62
Col8a2P25318 Gm6152-201ENSMUST00000151704 340 ntBASIC11.2□□□□□ -0.62
Col8a2P25318 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.2□□□□□ -0.62
Col8a2P25318 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Col8a2P25318 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.2□□□□□ -0.62
Col8a2P25318 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.2□□□□□ -0.62
Col8a2P25318 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Col8a2P25318 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.2□□□□□ -0.62
Col8a2P25318 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.2□□□□□ -0.62
Col8a2P25318 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Col8a2P25318 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm13369-201ENSMUST00000119442 987 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm27847-201ENSMUST00000183711 107 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Gm27375-201ENSMUST00000183799 107 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
Col8a2P25318 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.19□□□□□ -0.62
Col8a2P25318 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Col8a2P25318 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms