Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.58□□□□□ -0.39
Clk1P22518 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Clk1P22518 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.58□□□□□ -0.4
Clk1P22518 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Gm27989-201ENSMUST00000184721 107 ntBASIC12.58□□□□□ -0.4
Clk1P22518 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.58□□□□□ -0.4
Clk1P22518 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.58□□□□□ -0.4
Clk1P22518 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.58□□□□□ -0.4
Clk1P22518 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Clk1P22518 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Clk1P22518 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Clk1P22518 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Gm4875-201ENSMUST00000118257 786 ntBASIC12.57□□□□□ -0.4
Clk1P22518 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.57□□□□□ -0.4
Clk1P22518 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.57□□□□□ -0.4
Clk1P22518 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Clk1P22518 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.57□□□□□ -0.4
Clk1P22518 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Clk1P22518 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.56□□□□□ -0.4
Clk1P22518 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Clk1P22518 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Clk1P22518 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms