Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.39□□□□□ -0.75
Ccl1P10146 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Ccl1P10146 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccl1P10146 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Gm5177-201ENSMUST00000183092 997 ntBASIC10.39□□□□□ -0.75
Ccl1P10146 Gm27459-201ENSMUST00000184860 107 ntBASIC10.39□□□□□ -0.75
Ccl1P10146 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC10.39□□□□□ -0.75
Ccl1P10146 Birc2-201ENSMUST00000054878 378 ntBASIC10.39□□□□□ -0.75
Ccl1P10146 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccl1P10146 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccl1P10146 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ccl1P10146 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.39□□□□□ -0.75
Ccl1P10146 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.39□□□□□ -0.75
Ccl1P10146 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ccl1P10146 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 AA543401-201ENSMUST00000164248 1269 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.38□□□□□ -0.75
Ccl1P10146 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC10.38□□□□□ -0.75
Ccl1P10146 CT025555.1-201ENSMUST00000225901 1217 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 AC149294.4-201ENSMUST00000227870 882 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm15590-201ENSMUST00000078419 552 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.38□□□□□ -0.75
Ccl1P10146 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ccl1P10146 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm7049-201ENSMUST00000223520 1712 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Ccl1P10146 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ccl1P10146 Matn2-203ENSMUST00000226766 3252 ntBASIC10.38□□□□□ -0.75
Ccl1P10146 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms