Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.89□□□□□ -0.35
P04213 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gm5161-201ENSMUST00000075243 853 ntBASIC12.89□□□□□ -0.35
P04213 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
P04213 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.89□□□□□ -0.35
P04213 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
P04213 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.89□□□□□ -0.35
P04213 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.89□□□□□ -0.35
P04213 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
P04213 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P04213 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.88□□□□□ -0.35
P04213 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.88□□□□□ -0.35
P04213 Gm22189-201ENSMUST00000103822 86 ntBASIC12.88□□□□□ -0.35
P04213 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
P04213 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Gm29608-201ENSMUST00000190444 463 ntBASIC12.88□□□□□ -0.35
P04213 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.88□□□□□ -0.35
P04213 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
P04213 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P04213 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
P04213 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.88□□□□□ -0.35
P04213 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
P04213 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
P04213 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
P04213 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.87□□□□□ -0.35
P04213 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
P04213 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
P04213 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.87□□□□□ -0.35
P04213 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Gm26464-201ENSMUST00000157094 305 ntBASIC12.87□□□□□ -0.35
P04213 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.87□□□□□ -0.35
P04213 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.87□□□□□ -0.35
P04213 Gm19078-201ENSMUST00000206311 727 ntBASIC12.87□□□□□ -0.35
P04213 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.87□□□□□ -0.35
P04213 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
P04213 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
P04213 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
P04213 Syt7-204ENSMUST00000223586 1344 ntBASIC12.87□□□□□ -0.35
P04213 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.87□□□□□ -0.35
P04213 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
P04213 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
P04213 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
P04213 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms