Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gm6745-201ENSMUST00000199216 526 ntBASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Cpsf4lE9Q2N0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm27701-201ENSMUST00000184498 110 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm2495-201ENSMUST00000191160 466 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm9908-201ENSMUST00000211534 448 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Cpsf4lE9Q2N0 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.35□□□□□ -0.59
Cpsf4lE9Q2N0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms