Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Gm6485-201ENSMUST00000160676 439 ntBASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Gm43854-201ENSMUST00000200418 394 ntBASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Gm27530-201ENSMUST00000184096 98 ntBASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Gm22594-201ENSMUST00000104251 130 ntBASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Rprl1-201ENSMUST00000158050 327 ntBASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Gm20414-201ENSMUST00000172918 646 ntBASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Col6a3E9PWQ3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm14234-201ENSMUST00000119539 845 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm22144-201ENSMUST00000157402 102 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm8723-201ENSMUST00000166076 820 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm8701-201ENSMUST00000169259 874 ntBASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col6a3E9PWQ3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms