Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.25□□□□□ -0.13
Rfx8D3YU81 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rfx8D3YU81 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm15376-201ENSMUST00000122258 783 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm45668-201ENSMUST00000211271 493 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.24□□□□□ -0.13
Rfx8D3YU81 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfx8D3YU81 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.23□□□□□ -0.13
Rfx8D3YU81 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.23□□□□□ -0.13
Rfx8D3YU81 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Rfx8D3YU81 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfx8D3YU81 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfx8D3YU81 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.22□□□□□ -0.13
Rfx8D3YU81 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfx8D3YU81 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.22□□□□□ -0.13
Rfx8D3YU81 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms