Protein–RNA interactions for Protein: A2A259

Pkd2l1, Polycystic kidney disease 2-like 1 protein, mousemouse

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2l1A2A259 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm8602-201ENSMUST00000184045 607 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pkd2l1A2A259 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Gm18041-201ENSMUST00000218210 618 ntBASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pkd2l1A2A259 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pkd2l1A2A259 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms