Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Gm42442-201ENSMUST00000197951 1133 ntBASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 AC122459.1-201ENSMUST00000228373 885 ntBASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Gm10012-201ENSMUST00000078252 192 ntBASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cfap99A0A140LIX9 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Mir1247-201ENSMUST00000116706 82 ntBASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Gm38223-201ENSMUST00000194484 695 ntBASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Gm44397-201ENSMUST00000195950 113 ntBASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 AC154171.1-201ENSMUST00000224610 643 ntBASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap99A0A140LIX9 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Gm12384-201ENSMUST00000119228 919 ntBASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Gm13612-201ENSMUST00000119276 390 ntBASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap99A0A140LIX9 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gm42853-201ENSMUST00000201273 1387 ntBASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms